SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 24 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04849 Gentisic acid 154.0271 11.011e-12
P04862 Phosmidosine 473.1429 11.64e-11
P04925 No candidate annotation 475.1144 11.685e-11
P04966 Dihydroxytryptamine 192.0882 18.028e-11
P05020 Polyvidone 177.0492 12.955e-11
P05074 Lithospermoside 329.1087 12.768e-11
P05079 2-Chloroethyl ethyl sulfide 124.0135 14.713e-12
P05139 No candidate annotation 310.6259 11.577e-11
P05218 Fasmerianamine B 526.1042 13.458e-11
P05365 Histidyltryptophan 341.1529 11.426e-11