Overview Annotation GWAS Evidence Associated genes

P05079

Metabolite ID
P05079
Deionized mass
124.0135 Da
Average m/z
125.0214
Average RT
8.5849
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)9.301e-12
Glyma.11G086500 hypothetical protein AT2G17530:AT2G17530:Protein kinase superfamily protein__AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr11:6505886–6510196 (-)5.019e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.626e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.626e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.127e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)4.713e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.982e-12
Glyma.11G086100 hypothetical protein NA 1Chr11:6481228–6484662 (+)5.019e-12
Glyma.11G086300 hypothetical protein AT4G35520:MLH3:MUTL protein homolog 3 1Chr11:6487310–6496559 (-)5.019e-12
Glyma.11G086900 hypothetical protein AT2G17525:AT2G17525:Pentatricopeptide repeat (PPR) superfamily protein 1Chr11:6524266–6525385 (-)1.059e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.142e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.283e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)6.564e-11