SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 151 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52681 (+)-beta-Isolongibornene 204.1868 14.443e-13
P52712 1-O-Hexadecyl-lyso-sn-glycero-3-phosphocholine 481.3573 11.173e-13
P52734 Bialaphos 323.1245 16.851e-17
P52806 Matteuorienate C 588.1799 11.114e-12
P52876 Phellodensin F 502.1838 17.55e-12
P52902 Tyrosyl-Gamma-glutamate 309.1304 11.619e-12
P52918 5,6-Cyclopenteno-1,2-benzanthracene 268.1274 19.008e-12
P53010 Isopilocarpinic acid 226.1297 12.018e-12
P53109 No candidate annotation 335.3033 16.069e-11
P53239 13R-(S-cysteinylglycinyl)-14S-hydroxy-4Z,7Z,9E,11E,16Z,19Z-docosahexaenoic acid 520.2630 12.422e-11