SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 142 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48839 Glucoerysodine 461.2083 18.306e-12
P48869 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1465 11.543e-11
P48890 No candidate annotation 634.3190 12.331e-12
P48908 6-Methyl-3,5-heptadien-2-one 124.0876 19.055e-11
P48941 Chlorphentermine 183.0837 13.851e-12
P48944 Antibiotic BU 3292TA 644.3481 17.545e-14
P49006 PG(18:2(9Z,11E)+=O(13)/i-13:0) 718.4424 11.371e-11
P49032 Malyngamide C 455.2506 13.491e-11
P49053 (25S)-3-O-(beta-D-xylopyranosyl)-cholest-4-ene-3beta,6beta,8,15alpha,16beta,26-hexaol 598.3822 12.352e-11
P49160 No candidate annotation 924.4051 13.299e-12