SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 128 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P43281 Glutamine glutamate aspartate 565.1540 12.927e-12
P43306 No candidate annotation 102.0458 14.705e-14
P43317 Mutant IDH1 inhibitor 466.2691 11.324e-12
P43352 Antibiotic X 5108 810.4333 11.684e-11
P43357 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1870 13.638e-11
P43463 PGP(18:1(9Z)/20:4(6E,8Z,11Z,13E)-2OH(5S,15S)) 908.4845 19.969e-13
P43536 Antibiotic L 681217 659.3595 15.949e-11
P43543 26-O-beta-D-glucopyranosyl-(25R)-furost-5,16(17),20(22)-trien-3beta,26-diol-3-O-alpha-l-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside 882.4555 11.339e-11
P43639 17-Methyloctadecasphinganine 315.3118 11.246e-11
P43672 3beta-Hydroxyserrat-14-en-21-one 440.3658 13.237e-11