Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43536

Metabolite ID
P43536
Deionized mass
659.3595 Da
Average m/z
660.3636
Average RT
22.1224
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.104e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)1.595e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)3.14e-11
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)2.147e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.408e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.064e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.066e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.066e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.783e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.783e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.887e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.887e-14
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)7.006e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)5.104e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.104e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)4.812e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)4.812e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)1.503e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)1.503e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)4.812e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.123e-11
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)4.226e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.141e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)5.949e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)9.181e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.428e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.066e-14
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)9.105e-12
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)3.714e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.595e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)3.373e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)5.012e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.665e-13
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)2.986e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)2.999e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)1.241e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.798e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.801e-12
Glyma.19G247800 hypothetical protein NA 1Chr19:49385792–49388122 (-)7.982e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.755e-14
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)5.685e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.502e-12