Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43672

Metabolite ID
P43672
Deionized mass
440.3658 Da
Average m/z
441.3699
Average RT
22.2158
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.478e-12
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)1.169e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.476e-13
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)4.87e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)9.864e-13
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)9.864e-13
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)9.864e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.636e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.437e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.478e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.092e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)1.169e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.405e-11
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)6.174e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.75e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.476e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.476e-13
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)7.424e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)7.424e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.226e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)5.065e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.237e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.556e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)7.484e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)2.396e-12
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)8.991e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)5.197e-16
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.188e-13
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)8.162e-13
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)8.162e-13
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)9.864e-13
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)9.864e-13
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)9.864e-13
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)9.864e-13
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)9.864e-13
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)8.981e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)7.96e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)6.463e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.212e-11
Glyma.14G194100 hypothetical protein AT5G58620:AT5G58620:zinc finger (CCCH-type) family protein 1Chr14:45920719–45923885 (+)2.399e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)2.891e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.891e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)8.341e-15
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.906e-21
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)1.274e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.343e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)4.4e-13
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)4.402e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)4.402e-11