SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G057000

Description hypothetical protein

Gene interval Chr09:5140625–5145658 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features178Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records47

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2640.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

178 matching features · page 7 of 18

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05787 Gallic acid 170.0210 15.886e-11
P06029 Heptatrienenitrile 105.0564 15.708e-11
P06960 6-Methoxy-2-[(4-methylphenyl)methylsulfanyl]-1H-benzimidazole 284.0970 13.924e-11
P06961 Norhygrine 127.0981 12.553e-11
P06981 No candidate annotation 135.0636 14.005e-11
P07002 Melithiazol A 422.1327 15.43e-11
P07302 Melampyroside 450.1506 12.712e-11
P07827 No candidate annotation 809.2516 15.598e-11
P07903 Coptisine 319.0848 13.616e-11
P08546 No candidate annotation 169.0440 12.867e-11