SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G057000

Description hypothetical protein

Gene interval Chr09:5140625–5145658 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features178Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records47

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2640.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

178 matching features · page 2 of 18

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13345 Icariside II 514.1806 24.958e-11
P15206 (-)-13alpha-Hydroxytephrosin 426.1301 22.576e-12
P15527 (1S,4R)-passicapsin 417.1645 21.028e-13
P15582 No candidate annotation 853.3764 23.592e-12
P16247 Petasiphyll A 650.2751 21.177e-11
P16775 PA(10:0/13:0) 522.3343 22.102e-12
P17046 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1084 21.331e-11
P17202 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0669 27.689e-13
P18019 AH 135Y 291.1104 21.949e-12
P19715 N-Hydroxy-N-acetylcadaverine 160.1217 22.723e-14