Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15206

Metabolite ID
P15206
Deionized mass
426.1301 Da
Average m/z
427.1359
Average RT
11.9451
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
92
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

92 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)6.283e-16
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)2.847e-13
Glyma.09G057000 hypothetical protein NA 2Chr09:5140625–5145658 (+)2.576e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.217e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 2Chr16:26057276–26069534 (+)4.661e-14
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)2.876e-15
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)1.002e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)1.005e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)4.254e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.572e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.766e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.407e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)6.428e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)6.428e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)6.428e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)6.428e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)6.428e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)6.428e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)6.428e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.2e-14
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.2e-14
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)8.678e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)6.234e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.405e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.224e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)9.342e-11
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)2.445e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.5e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.412e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)4.214e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)6.795e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)6.795e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)1.74e-11
Glyma.09G056900 hypothetical protein NA 1Chr09:5128829–5132737 (+)5.86e-11
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)5.551e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.104e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.092e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.183e-13
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)3.398e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.983e-12
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)3.565e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)4.641e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)2.847e-11
Glyma.11G000200 hypothetical protein AT1G76670:AT1G76670:Nucleotide-sugar transporter family protein__AT5G42420:AT5G42420:Nucleotide-sugar transporter famil… 1Chr11:7666–11455 (+)2.807e-11
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)2.169e-12
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)5.031e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)7.305e-11
Glyma.11G154900 PRP3 NA 1Chr11:12643089–12645488 (+)3.034e-15
Glyma.11G155200 hypothetical protein NA 1Chr11:12699697–12702736 (-)6.062e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.217e-11
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)3.575e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)2.103e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.765e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.392e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.217e-13
Glyma.14G149900 hypothetical protein NA 1Chr14:32305914–32312520 (-)6.652e-11
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 1Chr14:32314092–32316626 (+)3.565e-12
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 1Chr14:32471354–32474446 (-)3.544e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.614e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.571e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)7.963e-13
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)1.183e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)2.847e-13
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)2.847e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.01e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.371e-17
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.887e-12
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)9.719e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)2.829e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.447e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.121e-13
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)8.427e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)8.851e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.412e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.412e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.327e-14
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.105e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)8.465e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)8.465e-11
Glyma.17G099300 hypothetical protein AT3G47610:AT3G47610:transcription regulator/ zinc ion binding protein 1Chr17:7838198–7840795 (-)4.119e-11
Glyma.18G044400 hypothetical protein AT3G03250:UGP1:UDP-GLUCOSE PYROPHOSPHORYLASE 1 1Chr18:3836270–3837813 (+)2.743e-11
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)1.32e-11
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)1.32e-11
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)1.32e-11
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)4.246e-13
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)2.287e-12
Glyma.18G274100 hypothetical protein AT5G38880:AUG5:HAUS augmin-like complex subunit 1Chr18:55672621–55681964 (+)6.071e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)2.258e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)6.333e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)2.586e-11
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)2.586e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.54e-13