SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G056900

Description hypothetical protein

Gene interval Chr09:5128829–5132737 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features110Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

110 matching features · page 7 of 11

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29865 No candidate annotation 1069.5175 17.769e-11
P30042 No candidate annotation 939.4715 14.492e-11
P30744 Nifekalant 405.2011 11.718e-13
P31222 Sufotidine 421.2096 13.641e-11
P31342 N-Methyl-N-nitroso-1H-purin-6-amine 178.0605 14.576e-11
P31991 Irroratin A 378.2030 15.742e-11
P32073 Tibouchinin 800.2208 14.813e-12
P32256 N-(7Z-tetradecenoyl)-homoserine lactone 309.2253 18.638e-11
P33001 4-methyl-3-pentenoic acid 114.0678 19.3e-11
P33471 Thelephantin E 548.1401 11.437e-11