SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G056300

Description hypothetical protein

Gene interval Chr09:5059486–5068979 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features175Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0057.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

175 matching features · page 6 of 18

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14892 Zygosporin E 491.2663 13.702e-12
P15071 Posoquenin 258.0732 16.585e-11
P15566 1-(2,4,6-Trimethylphenoxy)propan-2-amine 193.1459 16.054e-11
P15635 4-Aminophenylacetic acid 151.0649 18.99e-11
P15835 AFN911 511.2738 12.249e-11
P16045 No candidate annotation 173.1254 18.148e-12
P16093 N1,N10-Diferuloylspermidine 497.2577 11.709e-11
P16218 No candidate annotation 905.4256 15.829e-11
P17048 No candidate annotation 761.2212 12.116e-11
P17163 3',4'-Dihydroxy-7-methoxy-8-(3-methylbut-2-enyl)-2'''-(1-hydroxy-1-methylethyl)-furano-(4'',5'':6,5)favanone 452.1782 19.479e-13