SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 78 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00145 Limonenecarboxylic acid 180.1121 15.344e-11
P00476 Daphnodorin M 542.1208 19.571e-11
P00749 4(3H)-Quinazolinone, 2-ethyl-3-(o-tolyl)- 264.1257 11.592e-11
P00889 Diethylene glycol 106.0612 14.288e-11
P01114 No candidate annotation 149.0104 15.612e-11
P01276 (2-Carbamoyl-7-oxo-1,6-diazabicyclo[3.2.1]octan-6-yl) hydrogen sulfate 265.0324 18.364e-11
P01325 7-Methoxymurrayacine 307.1223 16.298e-11
P01728 2-Deoxy-D-ribitol 136.0719 16.478e-11
P02197 Ponticaepoxide 182.0745 12.07e-11
P02568 Oxepin 94.0415 11.026e-19