Overview Annotation GWAS Evidence Associated genes

P02568

Metabolite ID
P02568
Deionized mass
94.0415 Da
Average m/z
95.0485
Average RT
5.3972
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G300200 hypothetical protein AT5G13000:GSL12:glucan synthase-like 12 3Chr18:57789188–57820853 (+)2.046e-11
Glyma.17G242100 hypothetical protein NA 2Chr17:39766882–39771678 (+)5.184e-13
Glyma.09G053800 hypothetical protein NA 1Chr09:4737413–4755632 (-)1.026e-19
Glyma.10G226900 hypothetical protein AT1G76950:PRAF1:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein__AT5… 1Chr10:45733893–45742369 (-)2.211e-17
Glyma.17G242200 hypothetical protein NA 1Chr17:39801530–39805888 (+)5.184e-13
Glyma.17G242300 hypothetical protein AT5G42890:SCP2:sterol carrier protein 2 1Chr17:39809686–39812663 (+)5.184e-13
Glyma.20G155600 hypothetical protein AT5G52100:CRR1:Dihydrodipicolinate reductase, bacterial/plant 1Chr20:39449699–39454010 (+)2.211e-17