SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap

Maximum supporting SNP records6

Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 66 of 95

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P19400	Streptenol D	186.1240	2	7.643e-11
P20173	Pinocembrin 7-O-neohesperidoside 3'''-O-acetate	606.2006	2	2.342e-12
P20181	(2-Naphthyl)methanol	158.0725	2	4.881e-11
P20470	No candidate annotation	621.2504	2	4.522e-11
P20519	8,9-Dehydro-9-formylcycloisolongifolene	230.1670	2	3.73e-11
P20838	2-Naphthalen-1-ylbutanoic acid	214.0986	2	2.978e-11
P20858	8-[(2R,3S)-3-(8-hydroxyoctyl)oxiran-2-yl]octanoyl-CoA	1063.3325	2	7.87e-11
P21553	8-Isothiocyanatocycloamphilect-10-ene	329.2180	2	4.17e-11
P21711	No candidate annotation	833.2099	2	6.104e-11
P22033	No candidate annotation	791.2064	2	7.037e-11