Overview Annotation GWAS Evidence Associated genes

P20838

Metabolite ID
P20838
Deionized mass
214.0986 Da
Average m/z
215.1051
Average RT
13.4124
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
142
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

142 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 4Chr16:30652378–30659548 (+)2.26e-15
Glyma.16G161500 hypothetical protein NA 4Chr16:32076715–32092322 (-)1.316e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)5.892e-14
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.308e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.234e-13
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)4.153e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)5.477e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.044e-12
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)2.978e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)9.763e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.481e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.481e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.545e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.817e-16
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)1.431e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.94e-12
Glyma.16G180100 hypothetical protein NA 2Chr16:34070806–34076053 (+)4.125e-13
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)5.196e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.811e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)5.892e-14
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 2Chr20:34184591–34191923 (+)3.086e-11
Glyma.01G099100 hypothetical protein NA 1Chr01:33017228–33023840 (+)6.384e-12
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1Chr01:33115843–33125726 (-)6.384e-12
Glyma.01G099900 hypothetical protein NA 1Chr01:33275414–33282430 (+)6.384e-12
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)7.513e-11
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)7.513e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.923e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)6.462e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.269e-14
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)6.601e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)4.335e-11
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)6.47e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.697e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)9.341e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)7.476e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.187e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.187e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.603e-16
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.696e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.696e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.696e-15
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.465e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.406e-12
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.133e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.795e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.382e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.305e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.305e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.305e-13
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)6.758e-14
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)6.758e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.831e-18
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.831e-18
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.942e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)4.153e-12
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)1.255e-12
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)3.218e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.014e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.889e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.889e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.889e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.308e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.308e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)3.981e-12
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)3.981e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)9.485e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)6.789e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)2.684e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.426e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.044e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.044e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.044e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.044e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)7.133e-13
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)4.687e-15
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)6.596e-14
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.614e-14
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)4.479e-12
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)7.365e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)4.625e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)2.167e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.632e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.632e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.947e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.946e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.623e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.623e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)8.042e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)9.763e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.672e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.672e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.481e-15
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.545e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.817e-16
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)7.419e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)8.586e-14
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)2.614e-18
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)2.614e-18
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.673e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)4.654e-12
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)7.247e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)2.083e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)8.519e-16
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.599e-18
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)6.236e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)3.706e-15
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)1.973e-15
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)3.505e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)1.289e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.26e-15
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.94e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)7.13e-14
Glyma.16G158300 hypothetical protein AT5G43140:AT5G43140:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 1Chr16:31859405–31862567 (+)5.051e-11
Glyma.16G158400 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 1Chr16:31863760–31867327 (-)5.051e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)1.7e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.394e-12
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)4.126e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.59e-14
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)6.7e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.613e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)9.668e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.225e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.811e-13
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)5.419e-11
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)9.2e-11
Glyma.18G179200 hypothetical protein NA 1Chr18:43222934–43228759 (-)4.808e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)9.75e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)3.692e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)3.617e-12
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)1.484e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.868e-18
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.868e-18
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.086e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.453e-15
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.27e-14
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.478e-16
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.473e-11
Glyma.20G099900 hypothetical protein AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) 1Chr20:34312783–34318966 (+)1.485e-11
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)1.962e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)4.359e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.073e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)3.574e-11