SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 64 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12319 Didemethylcitalopram 296.1334 24.684e-12
P12370 Caffeoylferuloylspermidine 483.2428 24.116e-11
P12578 4E,6E-undecenal 166.1341 21.101e-11
P12607 1,3-Benzodioxole 122.0371 21.399e-11
P12629 Dodeca-5,7,9-trienoyl-CoA 943.2228 26.777e-11
P13121 Callysponginol sulfate A 458.2712 25.692e-11
P13251 Schradan 286.1322 28.636e-11
P13832 No candidate annotation 631.2790 21.909e-11
P13845 Mecarbinzid 308.0958 21.384e-13
P14158 Physalien 650.1559 27.607e-11