SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 4 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04967 Imazosulfuron 412.0435 33.852e-12
P05115 Methocarbamol 241.0942 37.619e-12
P05169 Dihydro-5-methyl-2(3H)-thiophenone 116.0285 32.849e-12
P05237 (E)-2-Tridecene-4,6,8-triyn-1-ol 186.1050 36.098e-13
P05243 5'-Deoxy-5'-fluoroadenosine 269.0921 31.28e-13
P05469 Resorcinol 110.0363 34.544e-17
P05479 Isopropyl 4-(1-(2-fluoro-4-(methylsulfonyl)phenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-yloxy)piperidine-1-carboxylate 477.1448 37.809e-11
P05526 Monuron-TCA 198.0572 32.616e-11
P05741 Nitrogen mustard N-oxide 171.0221 31.088e-11
P05770 1-Methylpiperidin-4-yl butanoate 185.1403 31.624e-11