SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 12 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11617 No candidate annotation 209.1463 31.332e-11
P11628 9-Angeloylretronecine 237.1350 33.401e-11
P11707 Fagaramide 247.1257 36.643e-11
P11735 Okaramine M 482.2333 32.258e-11
P11739 THF-L-glutamate 574.2136 33.36e-14
P11794 Okaramine A 520.2462 31.058e-13
P11838 Zafirlukast 575.2154 37.631e-14
P11861 N-Carboxyacetyl-D-phenylalanine 251.0800 33.562e-12
P11873 9R-hydroxy-2E,4E-decadienoic acid 184.1090 32.44e-14
P12066 Sildenafil 474.2105 33.135e-15