SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G052900

Description hypothetical protein

Gene interval Chr09:4652312–4653046 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features401Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

401 matching features · page 9 of 41

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12127 Paulomycin F 702.1925 11.523e-11
P12164 Guvacoline 141.0781 17.103e-12
P12237 Siwanine A 505.2575 13.837e-13
P12326 Dec-7-enedioylcarnitine 343.2052 11.043e-12
P12409 Ericamycin 499.1248 12.663e-11
P12840 Isobutyl beta-D-glucopyranoside 236.1250 13.43e-13
P13223 1,9Z,16-heptadecatrien-4,6-diyn-3,8-diol 258.1656 16.958e-11
P13391 1-(Indol-3-yl)propanol 3-phosphate 255.0623 11.446e-11
P13499 2-Aminoindan 133.0884 14.924e-11
P13688 4-Oxocyclohex-2-ene-1-carboxylate 140.0462 14.881e-11