SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G052700

Description hypothetical protein

Gene interval Chr09:4617652–4626364 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G31120:KUP10:K+ uptake permease 10

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1463Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0021.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1463 matching features · page 16 of 147

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07213 Boc-L-cysteine 221.0741 18.383e-11
P07222 Entacapone 305.1013 12.131e-16
P07278 No candidate annotation 435.1175 15.348e-11
P07347 Coumanolignan 318.1268 11.761e-11
P07352 Benzoxazole 119.0351 16.885e-12
P07729 No candidate annotation 679.1198 13.871e-12
P07827 No candidate annotation 809.2516 18.205e-16
P07890 5-Hydroxyindoleacetylglycine 248.0774 15.12e-11
P07994 6-Chlorohyellazole 321.0900 18.375e-12
P08028 Fipexide 388.1183 12.944e-11