SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.08G123500

Description hypothetical protein

Gene interval Chr08:9494946–9505931 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2347Overlap

Maximum supporting SNP records4

Features with ≥2 supporting SNP records2281

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0426.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2347 matching features · page 34 of 235

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P05028	dTDP-2,3,6-trideoxy-3-C-methyl-4-O-methyl-3-nitroso-beta-L-arabino-hexopyranose	573.1149	2	4.232e-12
P05035	No candidate annotation	350.0293	2	3.308e-11
P05055	CMP-3-deoxy-D-glycero-D-galacto-non-2-ulopyranosonate	573.1264	2	8.784e-11
P05065	N-(35-hydroxy-pentatriacontanoyl)-sphing-4-enine	819.8070	2	8.604e-13
P05139	No candidate annotation	310.6259	2	1.467e-14
P05141	2-(2-Chlorophenyl)-4-(3-(dimethylamino)phenyl)-5-methyl-1H-pyrazolo[4,3-c]pyridine-3,6(2H,5H)-dione	394.1195	2	4.315e-11
P05157	xi-5-Acetyltetrahydro-2(3H)-furanone	128.0458	2	3.649e-11
P05168	Jadomycin A	419.1388	2	1.611e-12
P05182	5a,11a-Dehydrooxytetracycline	458.1309	2	7.553e-14
P05212	No candidate annotation	368.6134	2	2.494e-12