SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.08G119300

Description hypothetical protein

Gene interval Chr08:9198213–9201688 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G29330:ERD2:ER lumen protein retaining receptor family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features729Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records178

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2455.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

729 matching features · page 31 of 73

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11391 Diadenosine diphosphate 676.1281 17.751e-11
P11427 Erinoside 388.0988 16.361e-11
P11618 (+)-Cyclotryprostatin D 379.1504 18.76e-11
P11763 Acetophenazine 411.1961 15.239e-13
P11799 No candidate annotation 318.6438 12.265e-13
P11879 Corydine 341.1680 16.319e-11
P11969 Gravacridonolchlorine 375.0857 13.771e-15
P11984 Prucalopride 367.1708 12.255e-13
P12282 Dicyclohexylcarbodiimide 206.1758 11.513e-11
P12289 Diospyros 346.1228 14.17e-12