Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11391

Metabolite ID
P11391
Deionized mass
676.1281 Da
Average m/z
677.1329
Average RT
10.7726
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
70
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

70 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.243e-12
Glyma.13G224800 hypothetical protein NA 3Chr13:33748627–33756494 (-)2.29e-14
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.042e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)5.427e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)9.911e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)8.604e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.136e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)9.424e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.243e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.705e-11
Glyma.19G127700 hypothetical protein AT5G12250:TUB6:beta-6 tubulin 2Chr19:38632803–38635633 (+)6.007e-13
Glyma.01G034800 hypothetical protein NA 1Chr01:3605528–3607302 (-)2.26e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)9.045e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.732e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.302e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)5.604e-13
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)5.604e-13
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)5.604e-13
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)5.604e-13
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)5.604e-13
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)5.604e-13
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)5.604e-13
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.042e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)4.843e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)1.363e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)2.743e-11
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)5.517e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.484e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.991e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.898e-12
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)2.158e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)5.427e-13
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)9e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)7.751e-11
Glyma.08G145700 hypothetical protein AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein 1Chr08:11083230–11086950 (-)6.562e-11
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 1Chr08:11092669–11096142 (-)6.562e-11
Glyma.08G146100 hypothetical protein NA 1Chr08:11119305–11124078 (+)7.43e-11
Glyma.08G147300 hypothetical protein NA 1Chr08:11238871–11242682 (+)4.463e-12
Glyma.08G149000 hypothetical protein AT3G14750:AT3G14750:structural maintenance of chromosomes domain protein 1Chr08:11425107–11427928 (+)3.433e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.075e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)2.307e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.235e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.235e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.235e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.235e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.58e-11
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)1.803e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.199e-15
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.199e-15
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)7.393e-11
Glyma.13G223900 hypothetical protein AT1G29690:CAD1:MAC/Perforin domain-containing protein 1Chr13:33672010–33679263 (-)1.616e-11
Glyma.13G224300 hypothetical protein NA 1Chr13:33703380–33715996 (-)2.29e-14
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)8.825e-14
Glyma.14G133600 hypothetical protein AT4G31390:ACDO1:Protein kinase superfamily protein 1Chr14:23182134–23193763 (+)4.674e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)8.604e-12
Glyma.15G150300 hypothetical protein AT5G49130:AT5G49130:MATE efflux family protein 1Chr15:12416065–12418420 (-)6.015e-11
Glyma.15G262200 hypothetical protein AT3G12760:AT3G12760:defective in cullin neddylation protein 1Chr15:49465185–49472595 (-)6.471e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)1.601e-13
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)2.587e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.677e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)3.381e-11
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)1.232e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)6.604e-11
Glyma.18G243300 hypothetical protein AT3G24090:GFAT:putative glucosamine-fructose-6-phosphate aminotransferase 1Chr18:53151480–53157909 (+)2.768e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.939e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.939e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)4e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)9.175e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.169e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)7.771e-11