SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.08G114700

Description hypothetical protein

Gene interval Chr08:8768854–8772973 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G13600:AT3G13600:calmodulin-binding family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features817Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records27

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0330.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

817 matching features · page 45 of 82

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28509 AG-3 455.1998 18.65e-11
P28677 10-ethoxy-2methylene-10-oxodecanoic acid 242.1473 15.649e-12
P28773 Pelargonidin 3-(4'''-p-coumarylrutinoside)-5-glucoside 886.2536 12.622e-11
P28904 Luteolin 7-(2''-glucosyllactate) 520.1133 14.504e-12
P29257 9R-hydroxy-2S,8S-dimethyl-3-oxo-2E,4E-undecadienoic acid 240.1363 19.112e-11
P29319 No candidate annotation 631.7931 15.946e-11
P29381 Phosphine oxide, diphenyl(2,4,6-trimethoxybenzoyl)- 396.1068 16.898e-11
P29409 No candidate annotation 760.1860 18.46e-11
P29420 Sordarin-3-carboxylic acid 508.2654 12.589e-11
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 11.366e-11