SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G100400

Description hypothetical protein

Gene interval Chr07:9523110–9526319 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G18050:AT3G18050:GPI-anchored protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features596Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records193

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4748.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

596 matching features · page 16 of 60

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37107 Amaronol A 320.0515 27.787e-13
P37987 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1463 26.259e-11
P38206 Anachelin 760.3266 23.339e-13
P38603 No candidate annotation 593.2741 28.5e-13
P38900 2-({[(4-Methoxyphenyl)methyl](methyl)amino}methyl)-2-methylpropane-1,3-diol 253.1648 21.035e-12
P38983 Chrysopentamine 559.2948 21.705e-11
P39149 Colubrin 940.4999 24.878e-13
P39162 FR 235222 556.3236 22.599e-11
P39167 No candidate annotation 366.7223 22.429e-17
P39502 [(2S,3R)-2-Amino-3-hydroxybutanoyl] (2S)-pyrrolidine-2-carboxylate 216.1108 23.068e-13