SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G074800

Description hypothetical protein

Gene interval Chr07:6806841–6815545 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G16840:AT3G16840:P-loop containing nucleoside triphosphate hydrolases superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features38Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0789.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

38 matching features · page 3 of 4

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30342 No candidate annotation 928.3387 18.474e-12
P31221 Paleatin A 472.1910 11.426e-12
P32286 Isopyruthaldine 768.3563 13.154e-13
P32337 No candidate annotation 952.3531 16.253e-12
P32764 No candidate annotation 924.3397 19.029e-11
P33721 No candidate annotation 838.3583 15.485e-11
P35123 AT 2433B1 644.2478 19.4e-12
P36046 Melibiitol 344.1342 12.659e-11
P36511 Delavirdine 456.1966 14.627e-12
P37232 No candidate annotation 1170.5480 16.094e-11