Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33721

Metabolite ID
P33721
Deionized mass
838.3583 Da
Average m/z
839.3653
Average RT
17.1229
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)5.914e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)6.094e-16
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)1.201e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)1.254e-12
Glyma.18G106300 hypothetical protein NA 2Chr18:11900700–11905446 (-)1.555e-11
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)5.061e-15
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.255e-16
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)3.108e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.668e-13
Glyma.19G125300 hypothetical protein AT3G56880:AT3G56880:VQ motif-containing protein__AT2G41010:CAMBP25:calmodulin (CAM)-binding protein of 25 kDa 2Chr19:38346007–38347425 (-)8.502e-14
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)6.503e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)1.36e-11
Glyma.03G042500 hypothetical protein NA 1Chr03:5367447–5370281 (+)2.723e-11
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)4.551e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.503e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.459e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.682e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.682e-12
Glyma.07G074800 hypothetical protein AT3G16840:AT3G16840:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr07:6806841–6815545 (-)5.485e-11
Glyma.08G132700 hypothetical protein NA 1Chr08:10163807–10167725 (-)3.866e-13
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.696e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.696e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.883e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.651e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.281e-11
Glyma.15G149800 hypothetical protein AT3G16690:SWEET16:Nodulin MtN3 family protein__AT4G15920:SWEET17:Nodulin MtN3 family protein 1Chr15:12371767–12375710 (-)1.783e-11
Glyma.15G149900 hypothetical protein NA 1Chr15:12376028–12378637 (+)4.297e-12
Glyma.15G150000 hypothetical protein AT4G15930:AT4G15930:Dynein light chain type 1 family protein 1Chr15:12379048–12385520 (+)4.297e-12
Glyma.15G150300 hypothetical protein AT5G49130:AT5G49130:MATE efflux family protein 1Chr15:12416065–12418420 (-)1.272e-11
Glyma.15G150400 hypothetical protein AT3G06840:AT3G06840:uncharacterized protein 1Chr15:12436393–12437800 (-)5.586e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.137e-12
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)2.849e-15
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)3.522e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)8.874e-12
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.201e-11
Glyma.17G038400 hypothetical protein AT3G17330:ECT6:evolutionarily conserved C-terminal region 6 1Chr17:2836787–2841979 (-)5.008e-11
Glyma.17G038500 hypothetical protein NA 1Chr17:2843533–2853547 (-)5.008e-11
Glyma.18G105800 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein 1Chr18:11773374–11782733 (+)4.872e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)3.231e-13
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)3.231e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.255e-16
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 1Chr19:3839225–3845784 (-)4.397e-12
Glyma.19G125400 hypothetical protein AT3G12390:AT3G12390:Nascent polypeptide-associated complex (NAC), alpha subunit family protein 1Chr19:38371477–38374357 (-)6.302e-13
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 1Chr19:38410642–38423531 (+)6.302e-13
Glyma.19G126000 CYP98A2 cytochrome P450 98A2 AT2G40890:CYP98A3:cytochrome P450, family 98, subfamily A, polypeptide 3 1Chr19:38430097–38435201 (-)7.805e-11
Glyma.19G127700 hypothetical protein AT5G12250:TUB6:beta-6 tubulin 1Chr19:38632803–38635633 (+)2.299e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.181e-11