Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32286

Metabolite ID
P32286
Deionized mass
768.3563 Da
Average m/z
769.3613
Average RT
16.6165
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
98
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

98 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)1.645e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.944e-11
Glyma.08G226000 hypothetical protein AT3G13062:AT3G13062:Polyketide cyclase/dehydrase and lipid transport superfamily protein 3Chr08:18321377–18335864 (-)3.282e-11
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)4.455e-11
Glyma.02G200700 hypothetical protein AT3G11560:AT3G11560:LETM1-like protein__AT5G06220:AT5G06220:LETM1-like protein 2Chr02:38435454–38459254 (-)3.097e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)7.571e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.779e-14
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.499e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.43e-11
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)1.105e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)2.644e-11
Glyma.18G201700 hypothetical protein NA 2Chr18:48175554–48180264 (+)1.5e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)7.758e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.472e-14
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)3.301e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)9.412e-12
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)7.317e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.325e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)5.618e-12
Glyma.02G200600 hypothetical protein AT3G11570:TBL8:TRICHOME BIREFRINGENCE-LIKE 8__AT5G06230:TBL9:TRICHOME BIREFRINGENCE-LIKE 9 1Chr02:38432334–38436063 (+)3.097e-11
Glyma.02G201100 hypothetical protein AT5G06200:CASP4:Uncharacterized protein family (UPF0497) 1Chr02:38497390–38499369 (-)3.097e-11
Glyma.02G201400 hypothetical protein AT5G06140:SNX1:sorting nexin 1 1Chr02:38539394–38547251 (+)3.097e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.85e-11
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)4.821e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.488e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)6.364e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.874e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.237e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.923e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.463e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.463e-14
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)5.941e-12
Glyma.06G129400 hypothetical protein AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type 1Chr06:10632042–10640023 (+)9.546e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)1.002e-12
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)1.002e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)5.036e-17
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)2.78e-12
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)5.333e-11
Glyma.06G285400 hypothetical protein AT1G06290:ACX3:acyl-CoA oxidase 3 1Chr06:47399250–47406151 (+)6.587e-14
Glyma.06G293700 hypothetical protein AT2G20740:AT2G20740:Tetraspanin family protein 1Chr06:48253149–48265560 (+)6.981e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)4.577e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)4.577e-11
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)7.394e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.945e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.945e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)5.189e-11
Glyma.07G074200 hypothetical protein NA 1Chr07:6770137–6772132 (+)2.344e-13
Glyma.07G074800 hypothetical protein AT3G16840:AT3G16840:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr07:6806841–6815545 (-)3.154e-13
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)2.489e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.571e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)7.571e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)7.571e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)7.571e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.47e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.47e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.534e-14
Glyma.08G226100 hypothetical protein AT3G13060:ECT5:evolutionarily conserved C-terminal region 5 1Chr08:18339384–18347070 (-)3.282e-11
Glyma.08G226400 hypothetical protein AT3G13050:NiaP:Major facilitator superfamily protein 1Chr08:18370226–18374060 (-)3.282e-11
Glyma.10G261100 hypothetical protein NA 1Chr10:48628245–48635184 (+)2.48e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)1.566e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)8.909e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)7.679e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.915e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.035e-14
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.499e-11
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)3.408e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)9.443e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.443e-11
Glyma.14G203800 hypothetical protein NA 1Chr14:46841491–46853116 (-)2.143e-13
Glyma.14G216200 hypothetical protein AT1G75500:WAT1:Walls Are Thin 1 1Chr14:48062215–48066980 (-)9.119e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.001e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.728e-14
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)4.511e-11
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)1.425e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)3.27e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.773e-13
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)6.797e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.965e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)3.55e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)4.156e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)6.861e-12
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)4.455e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.02e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.02e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)9.781e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)9.781e-11
Glyma.18G044100 hypothetical protein NA 1Chr18:3809348–3812858 (-)5.757e-11
Glyma.18G044200 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 1Chr18:3813589–3817289 (-)5.757e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)6.539e-12
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)6.539e-12
Glyma.18G252200 hypothetical protein NA 1Chr18:53899264–53899758 (+)7.481e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)3.001e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.939e-12
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)3.104e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.023e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)4.216e-12
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)8.797e-11
Glyma.20G217100 hypothetical protein AT1G64640:ENODL8:early nodulin-like protein 8 1Chr20:45278452–45280126 (-)2.931e-11