SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G069400

Description hypothetical protein

Gene interval Chr07:6270176–6283087 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G46020:BRM:transcription regulatory protein SNF2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features303Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records52

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1716.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

303 matching features · page 6 of 31

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52796 Famprofazone 377.2443 21.601e-11
P53116 No candidate annotation 243.8782 28.335e-13
P00106 Phenbenzamine hydrochloride 254.1831 16.761e-11
P00134 N-[5-(4,5-Dihydro-1H-imidazol-2-yl)-2-hydroxy-5,6,7,8-tetrahydronaphthalen-1-yl]methanesulfonamide 309.1136 11.864e-11
P00861 Aristelegone B 220.1093 13.939e-11
P00889 Diethylene glycol 106.0612 17.827e-13
P00974 Sertraline 305.0751 12.724e-11
P01505 (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid 269.1356 13.715e-11
P01926 Hyacinthacine A4 187.1208 14.649e-12
P03196 Aminomethyl fluorescein 361.0963 13.952e-11