SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G069400

Description hypothetical protein

Gene interval Chr07:6270176–6283087 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G46020:BRM:transcription regulatory protein SNF2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features303Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records52

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1716.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

303 matching features · page 25 of 31

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39647 1,10-Epoxy-aristolane 220.1808 17.259e-12
P39907 7-O-Methyltetrahydroochnaflavone 556.1412 15.848e-11
P39967 Trh-gly 420.1769 16.151e-11
P39989 Kahalalide V 931.4843 18.307e-11
P40332 No candidate annotation 366.7200 15.003e-12
P40400 Chellespontine 343.2452 15.105e-11
P40626 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5541 14.637e-11
P41319 Veralosine 617.3970 14.128e-11
P41373 3-Benzoyloxy-6-oxo-12-ursen-28-oic acid 574.3653 11.981e-11
P41392 1-Phenyl-1-cyclohexene 158.1071 18.443e-11