SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G015700

Description hypothetical protein

Gene interval Chr07:1244977–1251198 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G79750:NADP-ME4:NADP-malic enzyme 4

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1774Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0028.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1774 matching features · page 177 of 178

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54823 No candidate annotation 439.0791 12.904e-11
P54882 No candidate annotation 671.1545 19.013e-11
P55127 No candidate annotation 230.8918 12.392e-15
P55261 7-Isovaleroylcycloseverinolide 554.2511 13.559e-11
P55270 No candidate annotation 498.7246 17.331e-11
P55272 No candidate annotation 195.1180 15.334e-11
P55306 1-O-(2-methoxy-hexadecyl)-sn-glycerol 346.3034 13.574e-12
P55321 No candidate annotation 681.1737 17.993e-11
P55326 Ircinol A 412.3136 17.146e-12
P55336 No candidate annotation 283.2761 13.253e-11