SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G015700

Description hypothetical protein

Gene interval Chr07:1244977–1251198 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G79750:NADP-ME4:NADP-malic enzyme 4

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1774Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0028.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1774 matching features · page 160 of 178

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46016 Lignan 238.1723 19.664e-13
P46117 (S)-3-(6-Methoxypyridin-3-yl)-3-(2-oxo-3-(3-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)propyl)imidazolidin-1-yl)propanoic acid 439.2225 12.144e-14
P46130 AMD 070 349.2298 17.819e-11
P46179 Kitamycin A 464.2157 18.452e-12
P46204 SB 311009 408.2576 15.847e-14
P46226 No candidate annotation 514.7539 11.257e-11
P46227 Lycofawcine 323.2074 13.88e-12
P46281 Albothricin 500.2703 12.337e-11
P46292 Malyngamide I acetate 525.2883 15.255e-11
P46324 Ethopropazine 312.1675 17.362e-12