SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G317100

Description hypothetical protein

Gene interval Chr06:50586679–50589765 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G61520:AT5G61520:Major facilitator superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features876Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records45

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0514.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

876 matching features · page 86 of 88

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54074 No candidate annotation 258.8946 15.276e-13
P54179 No candidate annotation 361.6006 15.339e-12
P54194 Selexipag 496.2155 11.068e-11
P54195 No candidate annotation 665.1617 12.944e-11
P54346 PA(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:3(6,8,11)-OH(5)) 786.4869 17.639e-11
P54402 Catuabine E 371.1815 15.408e-14
P54509 n2-Acetyl,n6-methyllysine 202.1324 16.287e-11
P54556 No candidate annotation 276.9028 12.714e-11
P54617 No candidate annotation 606.9931 19.252e-14
P54657 3-Caffeoyl-4-feruloylquinic acid 530.1404 13.201e-12