Overview Annotation GWAS Evidence Associated genes

P54346

Metabolite ID
P54346
Deionized mass
786.4869 Da
Average m/z
787.4914
Average RT
30.9547
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)7.277e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)7.189e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.236e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.728e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.728e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.643e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)3.477e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.132e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.478e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.011e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.092e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)7.639e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.346e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.346e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)7.189e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.127e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.127e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.127e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.369e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)3.698e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.065e-13
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)4.143e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.065e-13
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.236e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)4.31e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)2.412e-11