SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G317100

Description hypothetical protein

Gene interval Chr06:50586679–50589765 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G61520:AT5G61520:Major facilitator superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features876Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records45

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0514.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

876 matching features · page 16 of 88

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07629 No candidate annotation 741.0583 17.134e-12
P07648 No candidate annotation 307.0178 11.098e-11
P07729 No candidate annotation 679.1198 13.44e-11
P07886 3-Demethylsimmondsin 2'-(Z)-ferulate 537.1879 11.341e-11
P08022 No candidate annotation 519.7362 11.55e-14
P08045 Dehydrolirinidine 279.1254 12.656e-11
P08053 Valylvaline 216.1456 14.551e-11
P08061 No candidate annotation 288.5719 13.961e-11
P08129 Gentianadine 149.0462 12.16e-11
P08169 No candidate annotation 943.2957 12.252e-13