Overview Annotation GWAS Evidence Associated genes

P07629

Metabolite ID
P07629
Deionized mass
741.0583 Da
Average m/z
742.0664
Average RT
9.5087
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
140
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

140 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 4Chr16:30388030–30390647 (-)2.312e-13
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)1.303e-13
Glyma.16G137600 hypothetical protein NA 3Chr16:29468438–29472890 (-)2.688e-13
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)9.337e-12
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)2.987e-11
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)3.97e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.118e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.118e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.383e-11
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 2Chr14:43637893–43642553 (+)6.731e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)4.585e-13
Glyma.16G138800 hypothetical protein NA 2Chr16:29609432–29615000 (+)6.135e-12
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 2Chr16:30434508–30475458 (-)9.861e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)4.817e-16
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.829e-13
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)2.174e-13
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.987e-13
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)8.011e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.091e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.056e-11
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)7.684e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.503e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.503e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)5.636e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)6.88e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)6.88e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.463e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.246e-14
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)1.172e-11
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)8.281e-12
Glyma.03G035800 hypothetical protein NA 1Chr03:4317466–4321009 (+)6.412e-11
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 1Chr03:4472672–4477787 (-)7.359e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)7.265e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)9.411e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.559e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.285e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.904e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.904e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.904e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.14e-13
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.668e-13
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)9.811e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)8.789e-16
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.293e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.348e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.357e-23
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.493e-21
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.701e-17
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.105e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.634e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)7.134e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.105e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)5.537e-11
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)3.72e-11
Glyma.08G303300 hypothetical protein NA 1Chr08:42134782–42139026 (+)1.57e-11
Glyma.08G303400 hypothetical protein NA 1Chr08:42139097–42147365 (+)1.57e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.18e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.128e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)5e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)9.197e-13
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)4.717e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.919e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)7.437e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.703e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)4.572e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)6.143e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)7.876e-13
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.724e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.505e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.505e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.601e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.601e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.22e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.22e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.066e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.261e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.261e-13
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.031e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.13e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 1Chr13:24677399–24693129 (-)6.378e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)6.378e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.118e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.118e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.229e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)7.931e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)5.99e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.575e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)6.15e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.121e-16
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.195e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.121e-16
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.121e-16
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.002e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.648e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)8.977e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.199e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.663e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)4.585e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.107e-11
Glyma.16G138400 hypothetical protein NA 1Chr16:29560913–29562163 (+)1.538e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.664e-11
Glyma.16G139400 hypothetical protein AT3G50870:MNP:GATA type zinc finger transcription factor family protein 1Chr16:29672011–29674023 (+)9.347e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.363e-15
Glyma.16G140700 hypothetical protein NA 1Chr16:29846716–29852078 (-)1.043e-11
Glyma.16G140800 hypothetical protein AT3G50690:AT3G50690:Leucine-rich repeat (LRR) family protein 1Chr16:29854784–29858843 (-)1.569e-13
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 1Chr16:29937044–29939337 (+)6.684e-14
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 1Chr16:29970884–29978773 (-)6.683e-14
Glyma.16G142800 hypothetical protein AT2G23760:BLH4:BEL1-like homeodomain 4 1Chr16:30201467–30210093 (+)9.152e-12
Glyma.16G143100 hypothetical protein AT2G23740:SUVR5:histone-lysine N-methyltransferase SUVR5 1Chr16:30245352–30261255 (-)9.152e-12
Glyma.16G143200 hypothetical protein AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) 1Chr16:30273151–30278680 (+)9.152e-12
Glyma.16G143600 hypothetical protein AT3G50820:PSBO2:photosystem II subunit O-2 1Chr16:30379885–30382483 (-)9.152e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)2.164e-20
Glyma.16G144300 hypothetical protein NA 1Chr16:30443185–30446450 (+)9.861e-12
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)7.518e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.895e-19
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)1.235e-13
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.895e-19
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.829e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.251e-17
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)1.259e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)9.37e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.704e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)6.152e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.832e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)8.457e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.457e-12
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)1.843e-12
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)5.985e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.61e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.987e-13
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)4.83e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)1.305e-11
Glyma.18G263300 hypothetical protein AT5G39420:cdc2cAt:CDC2C 1Chr18:54865827–54872924 (-)5.686e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)4.274e-14
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)6.516e-16
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)4.515e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.275e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.275e-13
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.485e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)8.878e-11