SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305700

Description hypothetical protein

Gene interval Chr06:49451501–49461369 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G05710:ACO3:aconitase 3

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1299Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records1289

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 3.0062.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1299 matching features · page 58 of 130

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24620 No candidate annotation 193.1526 32.258e-13
P24720 Scutellarein 7-neohesperidoside 594.1633 32.204e-12
P24729 Mycaleoxime 374.2614 31.439e-11
P24781 Stearyl citrate 444.3093 35.213e-14
P24821 ethyl 11Z-hexadecenoate 282.2559 31.072e-11
P24879 Polyarginine 486.3146 31.835e-14
P24976 (20R,22R)-20-O,22-O-(5'-hydroxy-methyl)-furfurylidene-2beta,3beta,25-trihydroxy-14beta-methyl-18-nor-5beta-cholesta-7,12-dien-6-one 570.3155 37.481e-11
P24980 Gossypol 518.1907 39.731e-11
P25000 No candidate annotation 704.8219 32.13e-12
P25017 CDP-DG(20:1(11Z)/TXB2) 1121.5707 31.184e-14