P24980
Metabolite ID
P24980
Deionized mass
518.1907 Da
Average m/z
519.1981
Average RT
14.5746
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 9.731e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 3 | Chr16:36856833–36863994 (-) | 1.124e-12 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 2 | Chr04:7187985–7192897 (+) | 1.368e-12 | |
| Glyma.08G122200 | hypothetical protein | NA | 2 | Chr08:9416766–9429995 (-) | 8.837e-13 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 1.3e-12 | |
| Glyma.16G210200 | hypothetical protein | NA | 2 | Chr16:36933402–36938940 (+) | 5.633e-11 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 7.256e-11 | |
| Glyma.03G007800 | hypothetical protein | AT4G26010:AT4G26010:Peroxidase superfamily protein | 1 | Chr03:758088–760465 (-) | 9.566e-11 | |
| Glyma.03G007900 | hypothetical protein | NA | 1 | Chr03:764330–766878 (-) | 2.001e-11 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 2.161e-13 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 2.159e-12 | |
| Glyma.04G097900 | hypothetical protein | AT5G65380:AT5G65380:MATE efflux family protein | 1 | Chr04:8857667–8865249 (+) | 9.26e-11 | |
| Glyma.04G098100 | hypothetical protein | AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein | 1 | Chr04:8887523–8888545 (-) | 7.02e-11 | |
| Glyma.04G098300 | hypothetical protein | NA | 1 | Chr04:8910522–8912389 (-) | 7.02e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 8.577e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.42e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 5.511e-21 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.139e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.353e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.353e-11 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 9.731e-11 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 9.731e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 2.246e-13 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 1 | Chr08:9435391–9437279 (+) | 1.3e-12 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 1.3e-12 | |
| Glyma.08G122600 | hypothetical protein | NA | 1 | Chr08:9445153–9450502 (+) | 8.837e-13 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 1.3e-12 | |
| Glyma.12G035800 | hypothetical protein | AT4G34750:AT4G34750:SAUR-like auxin-responsive protein family | 1 | Chr12:2621536–2622359 (-) | 8.554e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 8.461e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 8.461e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 8.036e-12 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 8.036e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 2.262e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 2.262e-11 | |
| Glyma.12G212300 | hypothetical protein | AT3G58710:WRKY69:WRKY DNA-binding protein 69 | 1 | Chr12:37131153–37134096 (+) | 7.39e-11 | |
| Glyma.12G212800 | hypothetical protein | NA | 1 | Chr12:37179924–37185798 (-) | 8.366e-11 | |
| Glyma.13G081100 | hypothetical protein | NA | 1 | Chr13:18881427–18886462 (-) | 6.168e-11 | |
| Glyma.13G200600 | hypothetical protein | AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein | 1 | Chr13:31428112–31429431 (-) | 4.156e-12 | |
| Glyma.13G201300 | hypothetical protein | NA | 1 | Chr13:31497499–31499001 (+) | 2.051e-11 | |
| Glyma.13G201600 | hypothetical protein | NA | 1 | Chr13:31521512–31522992 (+) | 3.368e-11 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 9.733e-18 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 9.733e-18 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 9.733e-18 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 1.201e-17 | |
| Glyma.13G204000 | hypothetical protein | AT3G12650:AT3G12650:uncharacterized protein | 1 | Chr13:31799233–31800440 (+) | 1.584e-11 | |
| Glyma.13G204200 | hypothetical protein | NA | 1 | Chr13:31822330–31826011 (+) | 1.198e-12 | |
| Glyma.13G204700 | hypothetical protein | AT1G11720:SS3:starch synthase 3 | 1 | Chr13:31872482–31883107 (-) | 3.276e-11 | |
| Glyma.13G204800 | hypothetical protein | AT4G04640:ATPC1:ATPase, F1 complex, gamma subunit protein | 1 | Chr13:31885462–31887911 (-) | 3.276e-11 | |
| Glyma.13G204900 | hypothetical protein | AT1G64570:DUO3:Homeodomain-like superfamily protein | 1 | Chr13:31888324–31898942 (-) | 3.276e-11 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 7.762e-13 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 7.762e-13 | |
| Glyma.17G251200 | hypothetical protein | NA | 1 | Chr17:40605249–40607536 (+) | 2.358e-11 | |
| Glyma.20G177600 | hypothetical protein | AT1G07900:LBD1:LOB domain-containing protein 1 | 1 | Chr20:41506046–41507720 (+) | 5.691e-11 |