SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305700

Description hypothetical protein

Gene interval Chr06:49451501–49461369 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G05710:ACO3:aconitase 3

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1299Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records1289

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 3.0062.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1299 matching features · page 114 of 130

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48630 1-heptadecylglycerone 3-phosphate 408.2637 38.809e-12
P48674 21-Fluoro-16-ethyl-19-norprogesterone 346.2284 38.672e-11
P48704 No candidate annotation 341.2094 32.444e-11
P48705 No candidate annotation 497.3679 36.072e-13
P48739 Dicumyl peroxide 270.1612 33.166e-13
P48892 (3E,5Z)-1,3,5-Heptatriene 94.0774 38.463e-14
P48924 Pebulate 203.1364 35.285e-15
P49013 2-Oxo-8-methylthiooctanoic acid 204.0809 34.85e-11
P49105 Methyl camaralate 542.3555 32.681e-12
P49106 Prodiamine 350.1210 33.092e-14