SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305200

Description hypothetical protein

Gene interval Chr06:49420013–49426780 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G21690:AT3G21690:MATE efflux family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features385Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records12

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0312.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

385 matching features · page 4 of 39

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03333 Antibiotic KA 6643J 424.0648 17.02e-12
P03559 Methacrifos 240.0210 13.416e-11
P03713 Chlordiazepoxide 299.0822 18.068e-12
P03812 Safflomin C 614.1655 17.429e-11
P03825 1,2-(dioctanoyl)-sn-glycero-3-phospho-(1'- myo-inositol-4',5'-bisphosphate) 746.2092 18.518e-11
P03881 1-Phenyl-1-cyclohexene 158.1087 16.523e-11
P03988 No candidate annotation 189.0592 13.683e-11
P04085 Gefitinib 446.1502 12.427e-13
P04137 Monomethyl phthalate 180.0435 19.341e-12
P04168 2-Nitrophenyl acetate 181.0357 12.228e-11