SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305200

Description hypothetical protein

Gene interval Chr06:49420013–49426780 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G21690:AT3G21690:MATE efflux family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features385Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records12

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0312.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

385 matching features · page 16 of 39

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17621 o-Benzoquinone 108.0194 13.325e-11
P17685 Beta-Casomorphin-5 579.2640 15.23e-12
P17845 Orientin 4'-O-glucoside-2''-O-rhamnoside 756.2150 16.471e-11
P18005 Lysylserine 233.1390 12.03e-11
P18019 AH 135Y 291.1104 14.988e-13
P18098 Ketotifen 309.1180 15.51e-13
P18177 4-Amino-5-chloro-N-[(3S,4R)-1-[3-(4-fluorophenoxy)propyl]-3-methoxypiperidin-4-yl]-2-hydroxybenzamide 451.1639 11.673e-12
P18253 No candidate annotation 936.2727 17.632e-12
P18315 TriMM 168.1129 12.082e-12
P18481 Eugenetin 220.0742 11.882e-12