SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305200

Description hypothetical protein

Gene interval Chr06:49420013–49426780 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G21690:AT3G21690:MATE efflux family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features385Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records12

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0312.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

385 matching features · page 15 of 39

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P16119 FP-biotin 592.3206 14.313e-12
P16266 Fibraurinoside 534.1755 11.984e-11
P16503 1-(6Z,9Z,12Z-octadecatrienoyl)-glycero-3-phosphoserine 519.2646 13.747e-11
P16650 Metazachlor 277.1012 18.375e-12
P16659 Arginine chloride 192.0767 15.253e-12
P16705 Aegelinol 246.0886 11.433e-11
P16775 PA(10:0/13:0) 522.3343 15.577e-12
P17048 No candidate annotation 761.2212 17.053e-11
P17500 Undec-4-enedioylcarnitine 357.2144 17.465e-11
P17551 Peliglitazar 530.2074 18.996e-11