Overview Annotation GWAS Evidence Associated genes

P17500

Metabolite ID
P17500
Deionized mass
357.2144 Da
Average m/z
358.2180
Average RT
12.5536
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
33
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

33 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.939e-16
Glyma.17G208400 hypothetical protein NA 2Chr17:34184145–34222159 (-)4.922e-11
Glyma.17G211500 hypothetical protein AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein 2Chr17:34916813–34922875 (+)9.459e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.335e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)9.016e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.93e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.463e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.485e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.485e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)1.804e-12
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)7.465e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.568e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.642e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)5.228e-11
Glyma.13G166900 hypothetical protein NA 1Chr13:28168741–28171815 (+)8.481e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.552e-15
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)4.763e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)2.528e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.528e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)7.499e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.73e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)9.548e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)9.548e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.05e-12
Glyma.16G165300 hypothetical protein NA 1Chr16:32447317–32449688 (-)4.389e-12
Glyma.17G207000 hypothetical protein NA 1Chr17:33925621–33935113 (+)4.922e-11
Glyma.17G208500 hypothetical protein NA 1Chr17:34224093–34230310 (-)4.922e-11
Glyma.17G209600 hypothetical protein AT2G25530:AT2G25530:AFG1-like ATPase family protein 1Chr17:34571688–34581787 (-)4.922e-11
Glyma.17G209700 hypothetical protein NA 1Chr17:34586468–34590309 (+)4.922e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.943e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.528e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.528e-13
Glyma.19G144200 hypothetical protein AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:40545843–40548762 (+)1.867e-11