SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G112700

Description hypothetical protein

Gene interval Chr06:9156973–9158659 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1840Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1840 matching features · page 8 of 184

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P02118 N-Isovaleryl-L-homoserine lactone 185.1050 12.914e-13
P02153 No candidate annotation 366.0323 11.596e-11
P02197 Ponticaepoxide 182.0745 13.761e-16
P02277 No candidate annotation 173.9815 14.541e-12
P02349 Cyclic ADP-ribose 541.0504 15.425e-14
P02352 6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol 197.0672 16.557e-17
P02430 3-O-Methylfluorescein 346.0836 11.017e-11
P02441 No candidate annotation 302.9462 17.013e-11
P02500 Polanrazine B 377.1219 19.232e-11
P02623 Tranexamic acid 157.1082 13.723e-11