SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G112700

Description hypothetical protein

Gene interval Chr06:9156973–9158659 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1840Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1840 matching features · page 181 of 184

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P53605 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one 312.2120 11.803e-12
P53640 Luteolin 7-(6''-malonylneohesperidoside) 680.1624 11.325e-11
P53747 Methyl ent-16-methoxy-6-oxo-7,13E-labdadien-15-oate 362.2443 11.877e-13
P54031 Leucamide A 611.2525 14.587e-12
P54059 Tetradeca-2,5,8-trienoylcarnitine 365.2593 11.034e-12
P54087 Ilicifolioside B 600.2606 15.696e-12
P54128 No candidate annotation 641.2541 12.995e-11
P54130 Agrimol F 640.2493 15.67e-11
P54194 Selexipag 496.2155 15.771e-11
P54280 Brachycerine 546.2208 12.647e-12