SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G112700

Description hypothetical protein

Gene interval Chr06:9156973–9158659 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1840Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1840 matching features · page 135 of 184

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39184 Cyclopentenyl propionate musk 264.2052 19.85e-11
P39187 4-(2-Aminoethyl)-2-ethoxyphenol 181.1081 19.952e-11
P39191 1,4-Divinylbenzene 130.0766 19.137e-11
P39278 Maoecrystal T 490.2499 17.331e-11
P39358 5,6-Dehydroalbine 230.1386 12.342e-14
P39403 Agathisflavone 538.0890 12.275e-13
P39424 3beta,21-Dihydroxy-pregna-5,7,9(11)-trien-20-one diacetate 412.2193 11.769e-11
P39439 LysoPE(0:0/18:3(9Z,12Z,15Z)) 475.2666 11.587e-13
P39464 Arginylvaline 273.1778 12.943e-11
P39528 No candidate annotation 498.7220 11.88e-16