SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G112700

Description hypothetical protein

Gene interval Chr06:9156973–9158659 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1840Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1840 matching features · page 110 of 184

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32563 6-Methylgingediol 310.2130 12.528e-11
P32581 4-hydroxyoct-6-enoylglycine 215.1133 12.317e-12
P32598 No candidate annotation 860.1378 19.395e-13
P32600 Delphinidin 3-(6''-O-4-malyl-glucoside)-5-(6'''-O-1-malyl-glucoside) 858.1626 15.53e-11
P32601 Methylendiglyoxal 128.0101 11.56e-12
P32620 Lyngbyapeptin B 721.3650 12.109e-11
P32635 No candidate annotation 251.0490 13.709e-11
P32650 Thonzylamine 286.1756 11.423e-12
P32655 Glycerylphosphorylinositol 314.0412 16.806e-13
P32664 1,3-Benzodioxole 122.0372 15.236e-12