SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 88 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13362 Quercetin 3-coumaroyl-triglucoside 488.1517 12.353e-13
P13384 Humantenidine 342.1566 11.115e-15
P13391 1-(Indol-3-yl)propanol 3-phosphate 255.0623 11.132e-15
P13392 1,5-Secovibralactone 208.1077 14.372e-11
P13409 No candidate annotation 706.1236 11.104e-12
P13412 1,1'-(1,8-Dioxo-1,8-octanediyl)bis-2,5-pyrrolidinedione 336.1283 18.012e-11
P13413 (4-Ethylnaphthalen-1-yl)[1-(5-fluoropentyl)-1H-indol-3-yl]methanone 387.2022 18.563e-18
P13414 3-Deoxy-3-fluoro-D-glucose 182.0589 15.881e-12
P13428 No candidate annotation 791.2036 15.876e-11
P13431 Glucoerucin 421.0546 13.723e-11