SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 75 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11790 No candidate annotation 136.0860 11.574e-11
P11794 Okaramine A 520.2462 12.551e-18
P11798 No candidate annotation 551.2696 13.83e-14
P11817 Safranal 150.1034 11.678e-20
P11838 Zafirlukast 575.2154 18.786e-13
P11861 N-Carboxyacetyl-D-phenylalanine 251.0800 14.482e-11
P11873 9R-hydroxy-2E,4E-decadienoic acid 184.1090 15.188e-13
P11877 Wilfornine D 915.2888 12.373e-11
P11879 Corydine 341.1680 13.858e-14
P11890 N-(1-Deoxy-1-fructosyl)tryptophan 380.1597 11.252e-11